Photo of Katrijn Van Deun
  • Prof. Cobbenhagenlaan 225, Simon Building, room S 718

    5037 DB Tilburg

    Netherlands

20052020
If you made any changes in Pure these will be visible here soon.

Research Output 2005 2020

Filter
Article
Article

A comparison of five recursive partitioning methods to find person subgroups involved in meaningful treatment-subgroup interactions

Doove, L. L., Dusseldorp, E., Van Deun, K. & Van Mechelen, I., 2014, In : Advances in Data Analysis and Classification. 8, 4, p. 403-425

Research output: Contribution to journalArticleScientificpeer-review

A flexible framework for sparse simultaneous component based data integration

Van Deun, K., Wilderjans, T. F., Van Den Berg, R. A., Antoniadis, A. & Van Mechelen, I., 2011, In : BMC Bioinformatics. 12, 1, 448.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Data integration
Data Integration
Lasso
Principal component analysis
Principal Component Analysis

A structured overview of simultaneous component based data integration

Van Deun, K., Smilde, A. K., Van Der Werf, M. J., Kiers, H. A. & Van Mechelen, I., 2009, In : BMC Bioinformatics. 10, 1, 246.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Data integration
Data Integration
Tissue culture
Biomolecules
Escherichia coli

A variable selection method for simultaneous component based data integration

Gu, Z. & Van Deun, K., 15 Nov 2016, In : Chemometrics & Intelligent Laboratory Systems. 158, p. 187-199

Research output: Contribution to journalArticleScientificpeer-review

Data integration
Data structures
Throughput
Computer simulation
Metabolomics
6 Downloads (Pure)
Open Access
File
4 Downloads (Pure)
Open Access
File
16 Downloads (Pure)

Cellular and molecular synergy in AS01-adjuvanted vaccines results in an early IFNγ response promoting vaccine immunogenicity

Coccia, M., Collignon, C., Hervé, C., Chalon, A., Welsby, I., Detienne, S., van Helden, M., Dutta, S., Genito, C. J., Waters, N. C., Van Deun, K., Smilde, A. K., van den Berg, R. A., Franco, D., Bourguignon, P., Morel, S., Garçon, N., Lambrecht, B. N., Goriely, S., van der Most, R. & 1 others, Didierlaurent, A. M., 2017, In : npj Vaccines. 2, 25.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
Lymph Nodes
Immunologic Adjuvants
Vaccine Immunogenicity
Ligands
QS 21

DISCO-SCA and properly applied GSVD as swinging methods to find common and distinctive processes

Van Deun, K., Van Mechelen, I., Thorrez, L., Schouteden, M., De Moor, B., Van Der Werf, M. J., De Lathauwer, L., Smilde, A. K., Kiers, H. A. L. & Tramontano, A. (ed.), 2012, In : PLoS ONE. 7, 5, e37840.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Singular value decomposition
Information Storage and Retrieval
Genes
Data integration
Pheromones

Identifying common and distinctive processes underlying multiset data

Van Deun, K., Smilde, A. K., Thorrez, L., Kiers, H. A. L. & Van Mechelen, I., 2013, In : Chemometrics & Intelligent Laboratory Systems. 129, p. 40-51

Research output: Contribution to journalArticleScientificpeer-review

Gene expression
Immunology
Data integration
Singular value decomposition
Fermentation

Integrating functional genomics data using maximum likelihood based simultaneous component analysis

Van Den Berg, R. A., Van Mechelen, I., Wilderjans, T. F., Van Deun, K., Kiers, H. A. & Smilde, A. K., 2009, In : BMC Bioinformatics. 10, 1, 340.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Functional Genomics
Maximum likelihood
Maximum Likelihood
Escherichia coli
Recovery

Interpreting degenerate solutions in unfolding by use of the vector model and the compensatory distance model

Van Deun, K., Groenen, P. J. F., Heiser, W. J., Busing, F. M. T. A. & Delbeke, L., 2005, In : Psychometrika. 70, 1, p. 45-69

Research output: Contribution to journalArticleScientificpeer-review

Unfolding
Majorization
Farthest Point
Loss Function
Signed

Joint mapping of genes and conditions via multidimensional unfolding analysis

Van Deun, K., Marchal, K., Heiser, W. J., Engelen, K. & Van Mechelen, I., 2007, In : BMC Bioinformatics. 8, 1, 181.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Chromosome Mapping
Unfolding
Genes
Gene
Microarrays

Majorization algorithms for inspecting circles, ellipses, squares, rectangles, and rhombi

Van Deun, K. & Groenen, P. J. F., 2005, In : Operations Research. 53, 6, p. 957-967

Research output: Contribution to journalArticleScientificpeer-review

Quality control
Majorization
Experiments
Archaeology
Numerical experiment

Model selection in principal covariates regression

Vervloet, M., Van Deun, K., van den Noortgate, W. & Ceulemans, E., 2016, In : Chemometrics & Intelligent Laboratory Systems. 151, p. 26-33

Research output: Contribution to journalArticleScientificpeer-review

Recovery

Multidimensional unfolding by nonmetric multidimensional scaling of Spearman distances in the extended permutation polytope

Van Deun, K., Heiser, W. J. & Delbeke, L., 2007, In : Multivariate Behavioral Research. 42, 1, p. 103-132

Research output: Contribution to journalArticleScientificpeer-review

Unfolding
Polytope
Permutation
Scaling
Spearman's coefficient
1 Downloads (Pure)
Open Access
File
Multiple Imputation
Nominal or categorical data
Longitudinal Data
Markov Model
Time Constant

Multiple salient goals pursued by job seekers in mandatory continuing professional education

Jacot, A., Raemdonck, I., Frenay, M. & Van Deun, K., 2019, In : Vocations and Learning. 12, 2, p. 297–317

Research output: Contribution to journalArticleScientificpeer-review

job seeker
education
qualification
taxonomy
unemployment
77 Downloads (Pure)

Not just a sum? Identifying different types of interplay between constituents in combined interventions

Van Deun, K., Thorrez, L., van den Berg, R. A., Smilde, A. K. & Van Mechelen, I., 2015, In : PLoS ONE. 10, 5, e0125334.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
19 Downloads (Pure)

Obtaining insights from high-dimensional data: Sparse principal covariates regression

Van Deun, K., Crompvoets, E. A. V. & Ceulemans, E., 2018, In : BMC Bioinformatics. 19, 1, 13 p., 104.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
Transcription
High-dimensional Data
Antibodies
Covariates
Genes

On the selection of the weighting parameter value in Principal Covariates Regression

Vervloet, M., Van Deun, K., Van Den Noortgate, W. & Ceulemans, E., 2013, In : Chemometrics & Intelligent Laboratory Systems. 123, p. 36-43

Research output: Contribution to journalArticleScientificpeer-review

Principal component analysis
Linear regression
Tuning
Recovery

Performing DISCO-SCA to search for distinctive and common information in linked data

Schouteden, M., Van Deun, K., Wilderjans, T. F. & Van Mechelen, I., 2014, In : Behavior Research Methods. 46, 2, p. 576-587

Research output: Contribution to journalArticleScientificpeer-review

QUINT: A tool to detect qualitative treatment-subgroup interactions in randomized controlled trials

Doove, L. L., Van Deun, K., Dusseldorp, E. & van Mechelen, I., 2016, In : Psychotherapy Research. 26, 5, p. 612-622

Research output: Contribution to journalArticleScientificpeer-review

6 Downloads (Pure)

RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R

Gu, Z. & Van Deun, K., 2019, In : Behavior Research Methods. 51, 5, p. 2268-2289

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
Information Storage and Retrieval
Computational Biology
Open Access
simultaneous analysis
Composite materials

Revealing the joint mechanisms in traditional data linked with big data

de Schipper, N. & Van Deun, K., 2019, In : Zeitschrift für Psychologie. 226, 4, p. 212-231

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
Depression
Psychological
Human Behavior
Surveys and Questionnaires
Data Integration

SCA with rotation to distinguish common and distinctive information in linked data

Schouteden, M., Van Deun, K., Pattyn, S. & Van Mechelen, I., 2013, In : Behavior Research Methods. 45, 3, p. 822-833

Research output: Contribution to journalArticleScientificpeer-review

Statistical Factor Analysis
Factor Analysis
Key Words
Emotion
Person

Testing the hypothesis of tissue selectivity: The intersection-union test and a Bayesian approach

Van Deun, K., Hoijtink, H., Thorrez, L., Van Lommel, L., Schuit, F. & Van Mechelen, I., 2009, In : BMC Bioinformatics. 25, 19, p. 2588-2594

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Selectivity
Bayesian Approach
Union
Intersection
Tissue

Tissue-specific disallowance of housekeeping genes: The other face of cell differentiation

Thorrez, L., Laudadio, I., Van Deun, K., Quintens, R., Hendrickx, N., Granvik, M., Lemaire, K., Schraenen, A., Van Lommel, L., Lehnert, S., Aguayo-mazzucato, C., Cheng-xue, R., Gilon, P., Van Mechelen, I., Bonner-weir, S., Lemaigre, F. & Schuit, F., 2011, In : Genome Research. 21, 1, p. 95-105

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Essential Genes
Cell Differentiation
MicroRNAs
Epigenomics
Histones

Unraveling affective dysregulation in borderline personality disorder: A theoretical model and empirical evidence

Ebner-Priemer, U. W., Houben, M., Santangelo, P., Kleindienst, N., Tuerlinckx, F., Oravecz, Z., Verleysen, G., Van Deun, K., Bohus, M. & Kuppens, P., 2015, In : Journal of Abnormal Psychology. 124, 1, p. 186-198

Research output: Contribution to journalArticleScientificpeer-review

Theoretical Models

Using Ribosomal protein genes as reference: A tale of caution

Thorrez, L., Van Deun, K., Tranchevent, L., Van Lommel, L., Engelen, K., Marchal, K., Moreau, Y., Van Mechelen, I., Schuit, F. & Huang, S. (ed.), 2008, In : PLoS ONE. 3, 3, e1854.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
Ribosomal Proteins
Genes
Essential Genes
Tissue
Microarrays
2 Downloads (Pure)

Variable selection in the regularized simultaneous component analysis method for multi-source data integration

Gu, Z., Van Deun, K. & de Schipper, N., 2019, In : Scientific Reports. 9, 21 p., 18608.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
Data integration
Global positioning system
Tuning

Weighted sparse principal component analysis

Van Deun, K., Thorrez, L., Coccia, M., Hasdemir, D., Westerhuis, J., Smilde, A. K. & Van Mechelen, I., 2019, In : Chemometrics & Intelligent Laboratory Systems. 195, 103875.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File
Principal component analysis
Vaccines
Transcription
MATLAB